Autometa
latest
Getting Started
🍏 Nextflow Workflow 🍏
🐚 Bash Workflow 🐚
📓 Bash Step by Step Tutorial 📓
Databases
Examining Results
Benchmarking
Installation
Autometa Python API
Usage
binning
taxonomy
config
common
How to contribute
Autometa modules
Legacy Autometa
License
Autometa
Usage
Edit on GitHub
Usage
Table of Contents
binning
summary.py
large_data_mode.py
unclustered_recruitment.py
recursive_dbscan.py
large_data_mode_loginfo.py
utilities.py
taxonomy
database.py
vote.py
majority_vote.py
lca.py
ncbi.py
gtdb.py
config
environ.py
databases.py
utilities.py
common
external
hmmsearch.py
bowtie.py
samtools.py
hmmscan.py
diamond.py
prodigal.py
bedtools.py
kmers.py
exceptions.py
coverage.py
metagenome.py
markers.py
utilities.py