majority_vote.py
usage: majority_vote.py
Script to assign taxonomy via a modified majority voting algorithm.
optional arguments:
-h, --help show this help message and exit
--lca LCA Path to LCA results table. (default: None)
--output OUTPUT Path to write voted taxid results table. (default:
None)
--dbdir DBDIR Path to taxonomy database directory. (default:
NCBI_DIR)
--dbtype {ncbi,gtdb} Taxonomy database to use (default: ncbi)
--orfs ORFS Path to ORFs fasta containing amino-acid sequences to
be annotated. (Only required for prodigal version <
2.6) (default: None)
--verbose Add verbosity to logging stream. (default: False)