Autometa documentation
Autometa: automated extraction of microbial genomes from individual shotgun metagenomes
An automated binning pipeline for single metagenomes, in particular host-associated and highly complex ones.
If you find Autometa useful to your work, please cite our Autometa paper:
Miller, I. J.; Rees, E. R.; Ross, J.; Miller, I.; Baxa, J.; Lopera, J.; Kerby, R. L.; Rey, F. E.; Kwan, J. C. Autometa: Automated extraction of microbial genomes from individual shotgun metagenomes. Nucleic Acids Research, 2019. DOI: https://doi.org/10.1093/nar/gkz148
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Contact
If you like Autometa, visit our lab website to find out more about our research.
For suggestions, queries or appreciation feel free to contact Dr. Jason Kwan at jason.kwan@wisc.edu