Autometa documentation

Autometa: automated extraction of microbial genomes from individual shotgun metagenomes
An automated binning pipeline for single metagenomes, in particular host-associated and highly complex ones.
If you find Autometa useful to your work, please cite our Autometa paper:
Miller, I. J.; Rees, E. R.; Ross, J.; Miller, I.; Baxa, J.; Lopera, J.; Kerby, R. L.; Rey, F. E.; Kwan, J. C. Autometa: Automated extraction of microbial genomes from individual shotgun metagenomes. Nucleic Acids Research, 2019. DOI: https://doi.org/10.1093/nar/gkz148

Guide

Contact

If you like Autometa, visit our lab website to find out more about our research.
For suggestions, queries or appreciation feel free to contact Dr. Jason Kwan at jason.kwan@wisc.edu

Indices and tables