Autometa
2.2.0
Getting Started
🍏 Nextflow Workflow 🍏
🐚 Bash Workflow 🐚
📓 Step by Step Tutorial 📓
Databases
Examining Results
Benchmarking
Installation
Autometa Python API
Usage
taxonomy
config
binning
common
How to contribute
Autometa modules
Legacy Autometa
License
Autometa
»
Usage
Edit on GitHub
Usage
Table of Contents
taxonomy
database.py
majority_vote.py
lca.py
ncbi.py
gtdb.py
vote.py
config
databases.py
utilities.py
environ.py
binning
large_data_mode_loginfo.py
unclustered_recruitment.py
utilities.py
summary.py
recursive_dbscan.py
large_data_mode.py
common
external
hmmsearch.py
prodigal.py
diamond.py
bedtools.py
samtools.py
bowtie.py
hmmscan.py
metagenome.py
markers.py
utilities.py
kmers.py
exceptions.py
coverage.py
Read the Docs
v: 2.2.0
Versions
latest
stable
2.2.0
2.1.0
2.0.3
2.0.2
2.0.1
2.0.0
main
dev
Downloads
On Read the Docs
Project Home
Builds