Autometa
2.0
  • Getting Started
  • 🍏 Nextflow Workflow 🍏
  • 🐚 Bash Workflow 🐚
  • 📓 Bash Step by Step Tutorial 📓
  • Databases
  • Examining Results
  • Benchmarking
  • Installation
  • Autometa Python API
  • Usage
  • How to contribute
  • Autometa modules
  • Legacy Autometa
  • License
Autometa
  • Python Module Index

Python Module Index

a
 
a
- autometa
    autometa.binning
    autometa.binning.large_data_mode
    autometa.binning.large_data_mode_loginfo
    autometa.binning.recursive_dbscan
    autometa.binning.summary
    autometa.binning.utilities
    autometa.common
    autometa.common.coverage
    autometa.common.exceptions
    autometa.common.external
    autometa.common.external.bedtools
    autometa.common.external.bowtie
    autometa.common.external.diamond
    autometa.common.external.hmmscan
    autometa.common.external.hmmsearch
    autometa.common.external.prodigal
    autometa.common.external.samtools
    autometa.common.kmers
    autometa.common.markers
    autometa.common.metagenome
    autometa.common.utilities
    autometa.config
    autometa.config.databases
    autometa.config.environ
    autometa.config.utilities
    autometa.datasets
    autometa.taxonomy
    autometa.taxonomy.database
    autometa.taxonomy.download_gtdb_files
    autometa.taxonomy.gtdb
    autometa.taxonomy.lca
    autometa.taxonomy.majority_vote
    autometa.taxonomy.ncbi
    autometa.taxonomy.vote
    autometa.validation
    autometa.validation.benchmark
    autometa.validation.cami
    autometa.validation.cluster_process
    autometa.validation.datasets

© Copyright 2016 - 2024, Ian J. Miller, Evan R. Rees, Izaak Miller, Shaurya Chanana, Siddharth Uppal, Kyle Wolf, Jason C. Kwan. Last updated on Dec 10, 2024.

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