majority_vote.py

usage: majority_vote.py

Script to assign taxonomy via a modified majority voting algorithm.

optional arguments:
  -h, --help       show this help message and exit
  --lca LCA        Path to LCA results table. (default: None)
  --output OUTPUT  Path to write voted taxid results table. (default: None)
  --dbdir DBDIR    Path to NCBI databases directory. (default: NCBI_DIR)
  --orfs ORFS      Path to ORFs fasta containing amino-acid sequences to be
                   annotated. (Only required for prodigal version < 2.6)
                   (default: None)
  --verbose        Add verbosity to logging stream. (default: False)