================
majority_vote.py
================

.. code-block:: bash

	usage: majority_vote.py

	Script to assign taxonomy via a modified majority voting algorithm.

	optional arguments:
	  -h, --help            show this help message and exit
	  --lca LCA             Path to LCA results table. (default: None)
	  --output OUTPUT       Path to write voted taxid results table. (default:
	                        None)
	  --dbdir DBDIR         Path to taxonomy database directory. (default:
	                        NCBI_DIR)
	  --dbtype {ncbi,gtdb}  Taxonomy database to use (default: ncbi)
	  --orfs ORFS           Path to ORFs fasta containing amino-acid sequences to
	                        be annotated. (Only required for prodigal version <
	                        2.6) (default: None)
	  --verbose             Add verbosity to logging stream. (default: False)